BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033F01SP1|AL429768
(858 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1313 1674 0.0
>3x_Contig1313
Length = 8010
Score = 1674 bits (843), Expect = 0.0
Identities = 855/859 (99%), Gaps = 1/859 (0%)
Strand = Plus / Minus
Query: 1 acccaaccagaccattcttggctatcttgggtggtgctaaggttgcagacaagattcaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6064 acccaaccagaccattcttggctatcttgggtggtgctaaggttgcagacaagattcaat 6005
Query: 61 tgatcgacaatttgttggacaaggtcgattctttgatcattggtggtggtatggctttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6004 tgatcgacaatttgttggacaaggtcgattctttgatcattggtggtggtatggctttca 5945
Query: 121 ccttcaagaaggtcttggaaaacactgaaatcggtgactccatctacgatgctgctggtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5944 ccttcaagaaggtcttggaaaacactgaaatcggtgactccatctacgatgctgctggtg 5885
Query: 181 ccgaattggttccaaagttggtcgaaaaggctaagaagaacaacgtcaagatcgtcttgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5884 ccgaattggttccaaagttggtcgaaaaggctaagaagaacaacgtcaagatcgtcttgc 5825
Query: 241 caactgacttcgtcattggtgacaagttctctgctgatgcyaacacaaaggttgtcaccg 300
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 5824 caactgacttcgtcattggtgacaagttctctgctgatgctaacacaaaggttgtcaccg 5765
Query: 301 acaaggaaggtattccaagcggctggcaagggttggacaacggtccagaatctagaaagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5764 acaaggaaggtattccaagcggctggcaagggttggacaacggtccagaatctagaaagg 5705
Query: 361 ctttcgctgccactgttgctgaagcyaagactatcgtctggaacggtccaccaggtgtct 420
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 5704 ctttcgctgccactgttgctgaagctaagactatcgtctggaacggtccaccaggtgtct 5645
Query: 421 tcgaatttgctcctttcgctaagggtaccgaagctctattggacgccgttgtcgcctcct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5644 tcgaatttgctcctttcgctaagggtaccgaagctctattggacgccgttgtcgcctcct 5585
Query: 481 ctcaagctggtaacaccgtcatcatcggtggtggtgaca-cgctaccgtcgccaagaagt 539
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 5584 gtcaagctggtaacaccgtcatcatcggtggtggtgacaccgctaccgtcgccaagaagt 5525
Query: 540 acggtgtcgtcgacaagatctctcacgtctccactggtggtggtgcttctttggaattgt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5524 acggtgtcgtcgacaagatctctcacgtctccactggtggtggtgcttctttggaattgt 5465
Query: 600 tggaaggtaaagaattgcctggtgtcactttcttgtccaacaagcaataaatgtaggatc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5464 tggaaggtaaagaattgcctggtgtcactttcttgtccaacaagcaataaatgtaggatc 5405
Query: 660 catcatcccttcccttcttgtttcctacatttttccacttatgtaatgagcatcttatga 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5404 catcatcccttcccttcttgtttcctacatttttccacttatgtaatgagcatcttatga 5345
Query: 720 tttaaaagctccacataaatttaactttttatgatacataattactttctttaatatcaa 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5344 tttaaaagctccacataaatttaactttttatgatacataattactttctttaatatcaa 5285
Query: 780 gaccaaaaacgtatagattcatggaattgttacaaccccaaacgctagcatgaaaataaa 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5284 gaccaaaaacgtatagattcatggaattgttacaaccccaaacgctagcatgaaaataaa 5225
Query: 840 tatgtactgtatttatgct 858
|||||||||||||||||||
Sbjct: 5224 tatgtactgtatttatgct 5206
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6266
Number of Sequences: 1807
Number of extensions: 6266
Number of successful extensions: 61
Number of sequences better than 1.0e-20: 1
length of query: 858
length of database: 10,358,551
effective HSP length: 16
effective length of query: 842
effective length of database: 10,329,639
effective search space: 8697556038
effective search space used: 8697556038
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)